Category

CNV


Usage

cnvnator -root file.root [-chrom chr_name1 ...] -view bin_size [-ngc]


Manual

Once prompted enter a genomic region, e.g.,

>12:11396601-11436500
or
>chr12:11396601-11436500
or
>12 11396601 11436500
or
>chr12 11396601 11436500

Additionally, one can specify the length of flanking regions (default is 10 kb) to
be also displayed, e.g.,

>12:11396601-11436500 100000
or
>chr12:11396601-11436500 100000
or
>12 11396601 11436500 100000
or
>chr12 11396601 11436500 100000

One can also perform instant genotyping by adding the word 'genotype', e.g.,

>12:11396601-11436500 genotype
or
>chr12:11396601-11436500 genotype
or
>12 11396601 11436500 genotype
or
>chr12 11396601 11436500 genotype


Share your experience or ask a question