Report putative somatic gene fusions from structural variants in a tumor-normal pair.
gemini fusions --min_qual 5 --in_cosmic_census tumor_normal.db
--min_qual [None]
The minimum required variant quality score.
--evidence_type STRING
The required supporting evidence types for the variant from LUMPY (“PE”, “SR”, or “PE,SR”).
--in_cosmic_census
Require at least one of the affected genes to be in the COSMIC cancer gene census.