bigBedSummary file.bb chrom start end dataPoints
This tool is part of UCSC Genome Browser's utilities.
Get summary data from bigBed for indicated region, broken into
dataPoints equal parts. (Use dataPoints=1 for simple summary.)
-type=X where X is one of:
coverage - % of region that is covered (default)
mean - average depth of covered regions
min - minimum depth of covered regions
max - maximum depth of covered regions
-fields - print out information on fields in file.
If fields option is used, the chrom, start, end, dataPoints
parameters may be omitted
-udcDir=/dir/to/cache - place to put cache for remote bigBed/bigWigs
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