bigWigToBedGraph in.bigWig out.bedGraph
This tool is part of UCSC Genome Browser's utilities.
- -chrom=chr1: if set restrict output to given chromosome
- -start=N: if set, restrict output to only that over start
- -end=N: if set, restict output to only that under end
- -udcDir=/dir/to/cache: place to put cache for remote bigBed/bigWigs
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