Category
Generic
Usage
blastToPsl [options] blastOutput psl
Manual
This tool is part of UCSC Genome Browser's utilities.
Options:
-scores=file - Write score information to this file. Format is:
strands qName qStart qEnd tName tStart tEnd bitscore eVal
-verbose=n - n >= 3 prints each line of file after parsing.
n >= 4 dumps the result of each query
-eVal=n n is e-value threshold to filter results. Format can be either
an integer, double or 1e-10. Default is no filter.
-pslx - create PSLX output (includes sequences for blocks)
Output only results of last round from PSI BLAST
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