Category
Generic
Usage
pslCheck fileTbl(s)
Manual
This tool is part of UCSC Genome Browser's utilities.
options:
-db=db - get targetSizes from this database, and if file doesn't exist,
look for a table in this database.
-prot - confirm psls are protein psls
-noCountCheck - don't validate that match/mismatch counts are match
the total size of the alignment blocks
-pass=pslFile - write PSLs without errors to this file
-fail=pslFile - write PSLs with errors to this file
-targetSizes=sizesFile - tab file with columns of target and size.
If specified, psl is check to have a valid target and target
coordinates.
-querySizes=sizesFile - file with query sizes.
-quiet - no write error message, just filter
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