Reference Code backup Executable files
Recalculate match,mismatch,repMatch columns in psl file.This can be useful if the psl went through pslMap, or if you've addedlower-case repeat masking after the fact
pslRecalcMatch in.psl targetSeq querySeq out.psl
This tool is part of UCSC Genome Browser's utilities.
where targetSeq is either a nib directory or a two bit file